High-density genetic maps

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August undefined, 2024

Web24 de dez. de 2015 · High-density genetic map construction and genome assembly anchoring in C. maxima The genetic linkage map reported herein is the first map developed using bin markers derived from SNPs in C. maxima . Compared to previously reported Cucurbita maps [ 13 , 38 – 40 , 62 – 65 ], this map had much higher marker density and … Web11 de abr. de 2024 · KLW1 was dominant in conditioning higher kernel weight and functioned mainly through affecting kernel length. Using F2 plants derived from KLW1 NIL, a high-density genetic map covering the QTL was constructed. KLW1 was consequently confined to the 0.6 cM Xwgrc4219-Xwgrc4067 interval by evaluating the recombinant …

High-Density Genetic Linkage Map Construction and White Rot …

Web1 de jul. de 2024 · Using specific-locus amplified fragment sequencing (SLAF-seq) technology, we constructed a high-density genetic linkage map with an average map … WebNational Center for Biotechnology Information cities skylines speed up time

Chromosome level high-density integrated genetic maps improve …

Web1 de jan. de 1998 · We expect to constuct a physical map with >70% genome coverage using the current high density molecular genetic map. To determine centromere positions on our genetic map, 139 markers on 12 chromosomes were identified to specific chromosome arms through dosage analysis according to the previous work ( Singh et al. … Web10 de jul. de 2012 · Introduction. Tomato (Solanum lycopersicum L.) has been a model species for basic studies in plant biology.The strength of genetic resources anchored to … WebThis identified 1,539 single-nucleotide polymorphisms (SNPs) and 80 InDel markers that provided a high-density genetic linkage map with a total length of 3036.9 cM. Quantitative trait locus mapping identified 15 QTLs for watermelon fruit quality-related traits, including β-carotene and lycopene content in fruit flesh, fruit shape index, skin thickness, flesh color, … diary of dreams grau im licht

A High-Resolution Single Nucleotide Polymorphism Genetic Map …

High-density multi-population consensus genetic linkage map for …

Web10 de jul. de 2024 · It relates to a method for differentiating recombinant inbred line (RIL) mapping individuals and various accessions of rice; a method of generating an RPGA-based high-density genetic linkage map of rice; a method for pan-genome -based QTL mapping in rice to identify one or more mapped markers linked to QTLs governing the specific … WebDeciphering the genetic architecture of adaptation of brown algae to environmental stresses such as temperature and salinity is of evolutionary as well as of practical interest. The filamentous brown alga Ectocarpus sp. is a model for the brown algae diary of diary wimpy kidWeb26 de fev. de 2024 · Grape white rot (Coniothyrium diplodiella) is a major fungal disease affecting grape yield and quality. Quantitative trait locus (QTL) analysis is an important … diary of dreams melancholin cd

"Web21 de nov. de 2024 · Highly saturated genetic linkage maps are extremely helpful to breeders and are an essential prerequisite for many biological applications such as the ... " - High-density genetic maps

High-density genetic maps

A Wheat 660 K SNP array-based high-density genetic map

Web3 de fev. de 2015 · Background QTLs controlling individual sugars and acids (fructose, glucose, malic acid and tartaric acid) in grape berries have not yet been identified. The present study aimed to construct a high-density, high-quality genetic map of a winemaking grape cross with a complex parentage (V. vinifera × V. amurensis) × ((V. … WebHigh-density genetic map, as a classic tool to study recombination, can be measured through comparing genetic and physical distances (cM/Mb) on the genome. The distribution of recombination is not uniformly distributed along the genome, and the location of recombination is more likely to occur in gene transcriptional start sites (TSSs) and …

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Web22 de nov. de 2024 · A high-density genetic map and growth related QTL mapping in bighead carp (Hypophthalmichthys nobilis). Scientific Reports 6 , 28679 (2016). Article … Web26 de set. de 2024 · These two reasons (genetic difference and SNP filter) may have contributed to the different marker density in P1 and P2. 2024; Li et al., 2014). The differences in recombination frequency may have caused our map length to be longer than previous reports (Williams, Goodman, & Stuber, 1995). The linkage group of 7D contains …

Web10 de jul. de 2012 · The concurrent development of high-throughput genotyping platforms and next generation sequencing (NGS) has increased the number and density of genetic markers, the efficiency of constructing detailed linkage maps, and our ability to overlay recombination and physical maps of the genome. We developed an array for tomato with … Web6 de dez. de 2024 · We studied the distribution of genes and recombination in wheat (Triticum aestivum) group 1 chromosomes by comparing high-density physical and …

Web20 de jun. de 2024 · High-density genetic maps can significantly improve the resolution of QTL mapping. We constructed a high-density recombination bin-based genetic map of eggplant based on 200 F2 plants from an ... Web21 de nov. de 2024 · Integration of three genetic maps and anchoring scaffolds into the integrated map. The DS reference genome scaffolds were anchored to the three genetic maps (Table 2). 2606, 2489 and 3143 unique markers from the MH, YM, and BD maps, corresponding to an average physical marker density of 7.4 markers/Mb, 7 markers/Mb, …

WebThe genotypic data were used to construct a high-density genetic map of 43 linkage groups (LGs) with a total length of 3594.0 cm and a marker density of 0.37 cm. A total of 116 QTL for all nine traits was detected on 33 LGs, spreading to all wheat chromosomes, except for Chr. 7D. Of these, six QTL (CTa.ui-4B.1, Q.CTg1.ui-5B-2.1, ...

Web16 de jul. de 2015 · The high-density genetic map constructed by GBS provides a framework for the assembly of WGS contigs. Previously, genetic maps and physical … diary of dreams menschfeind albumWeb1 de nov. de 2024 · High-density genetic maps and their anchoring information to the H. vulgare genetic maps (International Barley Sequencing Consortium, 2012; Mascher et al., 2013a) can be found in Supplementary File S5. The final maps contained 1449, 996, 720, and 943 markers for individual parental maps of PB1, FBB1, FBC_3, and FBD_5, … diary of dreams melancholin cities skylines specsWeb27 de abr. de 2014 · High density genetic maps of crosses of different genetic backgrounds are indispensable tools for investigating oil palm genetics. They are also … cities skylines specializationWeb15 de dez. de 2024 · High-density genetic linkage maps based on single nucleotide polymorphisms (SNPs) are essential for quantitative trait loci (QTL) mapping, trait-related gene identification, marker-assisted selection (MAS), genome assembly, and comparative genomic analysis in aquaculture fish species. cities skylines so many dead bodiesWeb22 de nov. de 2024 · A high-density genetic map and growth related QTL mapping in bighead carp (Hypophthalmichthys nobilis). Scientific Reports 6 , 28679 (2016). Article ADS CAS Google Scholar cities skylines stabilizing budgetWeb1 de abr. de 2024 · High-density linkage map construction. In the present study, Join-map and Lep-Map were used to construct the high-density genetics linkage map of A. davidianus. In both the maternal and paternal map, a total of 10,896 segregating SNPs were successfully classified into 30 linkage groups which was consistent with the karyotype 2n … diary of early winter shower